PESQUISA VETERINÁRIA BRASILEIRA

Abstract in English:

ABSTRACT.- Fonteque G.V., Battilana J., Paludo E. & Lima-Rosa C.A.V. 2014. Genetic polymorphism of fifteen microsatellite loci in Brazilian (blue-egg Caipira) chickens. Pesquisa Veterinária Brasileira 34(1):98-102. Departamento de Medicina Veterinária, Centro de Ciências Agroveterinárias, Universidade do Estado de Santa Catarina, Av. Luiz de Camões 2090, Lages, SC 88520-000, Brazil. E-mail: andrelimarosa@cav.udesc.br The purpose of this study was to investigate the genetic polymorphism of fifteen microsatellites loci in Brazilian (blue-egg Caipira) chickens. Samples were collected from 100 blue eggs of Caipira chickens from rural properties in the city of Dois Lajeados, RS. After DNA extraction, the fragments related to molecular markers LEI0248, LEI0221, LEI0214, LEI0192, LEI0217, LEI0254, LEI0194, LEI0212, MCW0371, ADL0278, LEI0234, MCW0183, MCW0216, MCW0330 and MCW0081 were obtained by polymerase chain reaction (PCR). The statistical analysis were carried out with the softwares ARLEQUIN 3.5 version and CERVUS 3.0.3 version. The allelic and genotypic frequencies, deviations from Hardy-Weinberg equilibrium, estimates of observed (HO) and expected (HE) heterozygosity and polymorphic information content (PIC) were obtained for each marker locus. A total of 186 alleles from 15 loci were obtained, with sizes ranging of 83 to 490 base pairs. The medium number of alleles was 12.4, the HE was 0.76±0.14 and HO was 0.49±0.21 and PIC was 0.706. The first conclusion is that the microsatellites used are polymorphic and can be used to genetic studies in chickens. The second is that the “Caipira” chicken (blue eggs) population investigated has a great genic variability, which makes than an important source of genetic resources for future animal breeding programs.

• Genetic polymorphism polimorfismo genétic

Abstract in Portuguese:

RESUMO.- Fonteque G.V., Battilana J., Paludo E. & Lima-Rosa C.A.V. 2014. Genetic polymorphism of fifteen microsatellite loci in Brazilian (blue-egg Caipira) chickens. [Polimorfismo genético de quinze loci de microssatélites em galinhas caipiras brasileiras de ovos azuis.] Pesquisa Veterinária Brasileira 34(1):98-102. Departamento de Medicina Veterinária, Centro de Ciências Agroveterinárias, Universidade do Estado de Santa Catarina, Av. Luiz de Camões 2090, Lages, SC 88520-000, Brazil. E-mail: andrelimarosa@cav.udesc.br O objetivo deste trabalho foi investigar a variabilidade genética de quinze loci de microssatélites em galinhas caipiras brasileiras de ovos azuis. Foram coletadas amostras de sangue de 100 galinhas caipiras brasileiras de ovos azuis provenientes de propriedades da região rural do município de Dois Lajeados, RS. Após extração do DNA foram utilizados marcadores para quinze loci de microssatélites: LEI0248, LEI0221, LEI0214, LEI0192, LEI0217, LEI0254, LEI0194, LEI0212, MCW0371, ADL0278, LEI0234, MCW0183, MCW0216, MCW0330 e MCW0081 que foram amplificados por meio da técnica de reação em cadeia da polimerase (PCR). A análise estatística foi conduzida utilizando o programa ARLEQUIN ver 3.5 e CERVUS ver 3.0.3. Foram determinadas às frequências alélicas, genotípicas e estimativas de heterozigosidade esperada (HE) e observada (HO), desvios do Equilíbrio de Hardy-Weinberg e conteúdo de informação polimórfica (PIC) para cada locus de microssatélite. Os resultados demonstraram um total de 186 alelos (somando os alelos dos 15 loci), com os fragmentos variando entre 83 e 490 pares de base, com número médio de alelos de 12,4, HE de 0,76±0,14 e HO de 0,49±0,21 e PIC de 0,706. Conclui-se que os microssatélites utilizados são polimórficos e que podem, portanto, serem utilizados para investigações genéticas em galinhas. A população de galinhas caipiras de ovos azuis analisada apresenta grande variabilidade gênica, o que as torna uma importante fonte de recursos genéticos, e que poderão, assim, serem utilizadas em futuros programas de melhoramento genético animal.

Abstract in English:

ABSTRACT.- Rocha A.C.G.P., Rocha S.L.S., Lima-Rosa C.A.V., Souza G.F., Moraes H.L.S., Salle F.O., Moraes L.B. & Salle C.T.P. 2008. Genes associated with pathogenicity of avian Escherichia coli (APEC) isolated from respiratory cases of poultry. Pesquisa Veterinária Brasileira 28(3):183-186. Centro de Diagnóstico e Pesquisa em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 8824, Porto Alegre, RS 91540-000, Brazil. E-mail: ana.crocha@terra.com.br The virulence mechanisms of avian pathogenic Escherichia coli (APEC) have been continually studied and are believed to be multi-factorial. Certain properties are primarily associated with virulent samples and have been identified in avian isolates. In this study a total of 61 E. coli, isolates from chicken flocks with respiratory symptomatology, were probed by Polimerase Chain Reation (PCR) for the presence of genes responsible for the adhesion capacity, P fimbria (papC) e F11 fimbria (felA), colicin production (cvaC), aerobactin presence (iutA), serum resistance (iss), temperature-sensitive hemagglutinin (tsh), and presence of K1 and K5 capsular antigens (kpsII). The iss gene was detected in 73,8%, tsh in 55,7%, iutA in 45,9%, felA in 39,3%, papC in 24,3%, cvaC in 23% and kpsII in18%.

• Escherichia coli virulence PCR poultry pathogenicity

Abstract in Portuguese:

ABSTRACT.- Rocha A.C.G.P., Rocha S.L.S., Lima-Rosa C.A.V., Souza G.F., Moraes H.L.S., Salle F.O., Moraes L.B. & Salle C.T.P. 2008. Genes associated with pathogenicity of avian Escherichia coli (APEC) isolated from respiratory cases of poultry. Pesquisa Veterinária Brasileira 28(3):183-186. Centro de Diagnóstico e Pesquisa em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 8824, Porto Alegre, RS 91540-000, Brazil. E-mail: ana.crocha@terra.com.br The virulence mechanisms of avian pathogenic Escherichia coli (APEC) have been continually studied and are believed to be multi-factorial. Certain properties are primarily associated with virulent samples and have been identified in avian isolates. In this study a total of 61 E. coli, isolates from chicken flocks with respiratory symptomatology, were probed by Polimerase Chain Reation (PCR) for the presence of genes responsible for the adhesion capacity, P fimbria (papC) e F11 fimbria (felA), colicin production (cvaC), aerobactin presence (iutA), serum resistance (iss), temperature-sensitive hemagglutinin (tsh), and presence of K1 and K5 capsular antigens (kpsII). The iss gene was detected in 73,8%, tsh in 55,7%, iutA in 45,9%, felA in 39,3%, papC in 24,3%, cvaC in 23% and kpsII in18%.

Abstract in English:

Simionatto S., Lima-Rosa C.A.V., Rubin L.L. & Canal C.W. 2005. [A nested-PCR protocol for detection of the chicken anemia virus.] Um protocolo de “nested-PCR” para detecção do virus da anemia das galinhas. Pesquisa Veterinária Brasileira 25(2):106-110. Laboratório de Virologia, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS 91540-000, Brazil. E-mail: claudio.canal@ufrgs.br This paper reports a nested polymerase chain reaction (nested-PCR) protocol for detection of chicken anemia virus (CAV), the causal agent of infectious chicken anemia. For DNA extraction from clinical samples, a method based on guanidine thiocyanate was found more sensitive and practical than other extraction protocols tested. The pair of primers used in the initial PCR targeted a 664 bp fragment on the VP1 gene. The primers for the internal PCR targeted a fragment of 520 bp. The specificity of the primers was evaluated on samples of CAV controlled flocks. Thirty different viruses and bacteria isolated from chickens did not give rise to any amplification product in the assay. The sensitivity of the nested-PCR was determined on serial dilutions of a CAV vaccine. The nested-PCR was more sensitive than a one step PCR and was able to detect at least 0.16 TCID50 of the vaccine strain. In addition, the protocol employed here detected viral DNA from tissues, sera and litter from flocks with or without clinical signs of disease. It is concluded that the nested-PCR protocol described here is more sensitive, faster and less cumbersome than virus isolation in cell culture as a diagnostic technique for detection of CAV.

• Chicken anemia virus CAV molecular diagnosis nested-PCR.

Abstract in Portuguese:

Simionatto S., Lima-Rosa C.A.V., Rubin L.L. & Canal C.W. 2005. [A nested-PCR protocol for detection of the chicken anemia virus.] Um protocolo de “nested-PCR” para detecção do virus da anemia das galinhas. Pesquisa Veterinária Brasileira 25(2):106-110. Laboratório de Virologia, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS 91540-000, Brazil. E-mail: claudio.canal@ufrgs.br This paper reports a nested polymerase chain reaction (nested-PCR) protocol for detection of chicken anemia virus (CAV), the causal agent of infectious chicken anemia. For DNA extraction from clinical samples, a method based on guanidine thiocyanate was found more sensitive and practical than other extraction protocols tested. The pair of primers used in the initial PCR targeted a 664 bp fragment on the VP1 gene. The primers for the internal PCR targeted a fragment of 520 bp. The specificity of the primers was evaluated on samples of CAV controlled flocks. Thirty different viruses and bacteria isolated from chickens did not give rise to any amplification product in the assay. The sensitivity of the nested-PCR was determined on serial dilutions of a CAV vaccine. The nested-PCR was more sensitive than a one step PCR and was able to detect at least 0.16 TCID50 of the vaccine strain. In addition, the protocol employed here detected viral DNA from tissues, sera and litter from flocks with or without clinical signs of disease. It is concluded that the nested-PCR protocol described here is more sensitive, faster and less cumbersome than virus isolation in cell culture as a diagnostic technique for detection of CAV.